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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903011.1_cds_XP_016452985.1_47154
CDS Infomation

[gene=LOC107777469] [db_xref=GeneID:107777469] [protein=boron transporter 4-like isoform X2] [protein_id=XP_016452985.1] [location=complement(join(405..410,10008..10148,10234..10513,10750..11081,11160..11276,11376..11471,11556..11729,11824..11990,18445..18610,18699..18837,18918..19110,19226..19308,19382..19485))] [gbkey=CDS]
Sequence

ATGAAGATTCAGGGAATTCCATTAAAAGGCATTGCAAAGGATATTGGAGGGCGCATGTCT
TGCTACAAGCAGGATTGGATTGCCGGTATCAGATCCGGGATAGGGATATTGGCTCCAACT
ACGTATATATTTTTCGCATCTGCTCTTCCAGTTATTGCTTTTGGAGAACAGTTGAGCAGA
GATACAGATAGGAGCCTGAGCACTGTGGAGACTTTAGCTTCTACTGCTATTTGTGGTATT
ATTCACTCCATATTAGGTGGGCAACCTCTATTGCTATTAGGAGTTGCAGAACCTACTATT
ATTATGTACAGTTACCTCTACAAGTTTGCCAAAGGGAGAGACGACTTGGGACAAACCCTT
TACTTAGCTTGGACTGGATGGGTTTGTGTGTGGACAGCTCTAATATTGATTCTTCTAGCA
GTATTTAATGCCTGTTCCATCGTCAATAGATTTACAAGGATTGCTGGGGAGACTTTTGGC
ATGCTTATCACCGTGCTTTTCATGCAAGAGGCAATTAAGGGATTGGTGAGTGAGTTTCAC
ATCCCTAAATCGGAGGACCCAAGTTCAGAAAAATATAAGTTTCATTGGCTTTACACAAAT
GGGTTGCTTGGAATCATATTCACTATTGGCCTTCTCTATACAGCCTTAAAGAGCAGGAAA
GCAAGGTCATGGTGGTATGGCACAGGCTGGTTTAGAAGCTTTGTAGCTGATTATGGAGTT
CCATTGATGGTTCTTGTGTGGTCAGCTCTCTCATTTATGGTCCCTGGCAAACTTCCATCT
GGAGTTCCTAGAAGGCTCTATAGTCCCCTTCCTTGGGAATCTGCTTCTTTATATCACTGG
ATTGTAATTAAGGATATGGGGAAGGTTCCTCCAGTATACATATTTGCTGCCCTGATACCA
GCCTTGATGATAGCTGGTCTCTATTTCTTCGATCACAGTGTTGCTTCTCAGATGGCACAA
CAAAAGGAGTTCAACCTAAAGAATCCTTCTGCTTATCATTATGATATCTTACTCTTGGGA
TTTATGACTTTGCTATGTGGTTTGATTGGATTGCCTCCTTCAAATGGTGTCTTGCCACAG
TCCCCTATGCACACTAAAAGCTTGGCTGTTCTTAAGAAACAGCTGATCCGGAAGAAGATG
GTTGAAAGTGCAAAGGAAAGTATCAGGCGAAAAGCTAGCAACTCTGAAATCTATGTCAAC
ATGCAAACTGTGTTCATAGAAATAGACAGTTCTCCTGTTACTGCTATAGTTAAAGAGCTA
GAACACTTAAAGGAGGCAGTAATGAAACATGAACTAAATGAATATGAAAATGGTGAAAAG
TTAAATGGAAAATTTGATCCAGAGAATCATATTGATGCTTACTTGCCCGTTCGATTGAAT
GAACAAAGAGTGAGCAACCTATTGCAGTCACTACTAGTGGCAGCATCGGTAGGTGCAATG
CCAGTAATAAAGAAGATACCAACATCAGTTCTTTGGGGATATTTTGCATACATGGCTATT
GACAGCCTGCCAGGAAATCAACTATGGGAAAGAATCTTGCTTCTCTTCATCACCCCTAGC
AGGAGATTTAAGGTCCTAGAAGGGATGCATGCATCTTTTGTGGAGGCAGTACCATTCAAA
TACATCGCAATATTCACAGTGTTCCAATTTGTGTTCTTACTTGTGTGCTTTGGAGTCACA
TGGATTCCCATAGCTGGCATTCTCTTCCCATTGCCATTCTTTATTCTCATAAGCATAAGG
CAACATTTGCTTCCCAAGTTGTTCCACCCTCGTCATTTGCAAGAGCTTGATGCAGCTGAG
TATGGGGAAATTGCTGGTTCTCCACAACGTGCACTTAGATTTTCTTTTAGTGAAACGGAG
GCAACTATTCCAAGAATTGAAGAAGCTGAAATTGAAATTTCGGATGCTGAGATTTTGGAT
GAACTTACGACCAGTAGAGGAGAGTTGAAAGTCAGGGCAGCTAGCTCCAGCGAGGCCGAT
AAGCGTCCACAGGTATAG

Peptide Sequence

PEP ID

XP_016452985.1
PEP Infomation

PREDICTED: boron transporter 4-like isoform X2 [Nicotiana tabacum]
Sequence

MKIQGIPLKGIAKDIGGRMSCYKQDWIAGIRSGIGILAPTTYIFFASALPVIAFGEQLSR
DTDRSLSTVETLASTAICGIIHSILGGQPLLLLGVAEPTIIMYSYLYKFAKGRDDLGQTL
YLAWTGWVCVWTALILILLAVFNACSIVNRFTRIAGETFGMLITVLFMQEAIKGLVSEFH
IPKSEDPSSEKYKFHWLYTNGLLGIIFTIGLLYTALKSRKARSWWYGTGWFRSFVADYGV
PLMVLVWSALSFMVPGKLPSGVPRRLYSPLPWESASLYHWIVIKDMGKVPPVYIFAALIP
ALMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQ
SPMHTKSLAVLKKQLIRKKMVESAKESIRRKASNSEIYVNMQTVFIEIDSSPVTAIVKEL
EHLKEAVMKHELNEYENGEKLNGKFDPENHIDAYLPVRLNEQRVSNLLQSLLVAASVGAM
PVIKKIPTSVLWGYFAYMAIDSLPGNQLWERILLLFITPSRRFKVLEGMHASFVEAVPFK
YIAIFTVFQFVFLLVCFGVTWIPIAGILFPLPFFILISIRQHLLPKLFHPRHLQELDAAE
YGEIAGSPQRALRFSFSETEATIPRIEEAEIEISDAEILDELTTSRGELKVRAASSSEAD
KRPQV

Transcript Sequence

Gene sequence data has not been registered.